The Museum biological section is made by several collections.

• The ornithological collection that counts more than 2.500 specimens.
• The entomological collection that comprises 572 boxes with more than 85.000 insects.
• The malacological collection
• The arachnological collection
• The geo-palaeontological collection
• A stuffed mammal collection of accidentally killed, or poached, animals from the Faenza territory.